STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF93861.1ADP-ribosyl-(dinitrogen reductase) hydrolase; KEGG: dau:Daud_0325 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1. (304 aa)    
Predicted Functional Partners:
AEF93848.1
KEGG: dau:Daud_0314 appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing.
    
 0.866
AEF93862.1
NADPH dehydrogenase; KEGG: amt:Amet_4335 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal.
  
    0.600
AEF93860.1
KEGG: drm:Dred_0628 hypothetical protein.
       0.532
AEF93415.1
KEGG: drm:Dred_2861 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
    
 
 0.469
AEF94002.1
KEGG: drm:Dred_2820 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII.
    
 
 0.469
AEF94003.1
KEGG: drm:Dred_2819 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII.
    
 
 0.469
AEF95417.1
KEGG: bth:BT_2685 hypothetical protein.
    
 
 0.469
AEF93859.1
NAD-dependent deacetylase; KEGG: drm:Dred_2032 silent information regulator protein Sir2; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2.
       0.401
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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