STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF93863.1PFAM: Copper amine oxidase-like, N-terminal; KEGG: slp:Slip_1942 copper amine oxidase domain protein. (261 aa)    
Predicted Functional Partners:
AEF95440.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: bpf:BpOF4_06365 YkwD.
 
    0.781
AEF95092.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: pth:PTH_2788 hypothetical protein.
  
     0.774
AEF93456.1
S-layer domain-containing protein; PFAM: S-layer homology domain; KEGG: drm:Dred_2738 S-layer domain-containing protein.
  
    0.772
AEF95247.1
S-layer domain-containing protein; PFAM: S-layer homology domain; PEGA; KEGG: drm:Dred_3091 Ig family protein.
  
     0.771
AEF95229.1
S-layer domain-containing protein; PFAM: S-layer homology domain; KEGG: swo:Swol_1184 hypothetical protein.
  
   
 0.769
AEF94710.1
S-layer domain-containing protein; PFAM: S-layer homology domain; KEGG: drm:Dred_2478 S-layer domain-containing protein.
  
     0.766
AEF95439.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: drm:Dred_3142 copper amine oxidase domain-containing protein.
  
     0.762
AEF95404.1
KEGG: drm:Dred_3108 polysaccharide pyruvyl transferase; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
  
     0.750
AEF94582.1
S-layer domain-containing protein; PFAM: S-layer homology domain; KEGG: drm:Dred_2344 S-layer domain-containing protein.
  
   
 0.728
AEF95409.1
KEGG: pth:PTH_2777 hypothetical protein.
  
     0.719
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.