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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF94511.1PFAM: ThiamineS; KEGG: drm:Dred_2272 hypothetical protein. (102 aa)    
Predicted Functional Partners:
AEF94510.1
PFAM: ThiamineS; KEGG: drm:Dred_2271 thiamineS protein.
 
     0.805
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
  
  
 0.768
AEF94504.1
KEGG: drm:Dred_2264 UBA/ThiF-type NAD/FAD binding protein; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB), conserved domain; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB.
  
 
 0.646
AEF94033.1
CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; KEGG: drm:Dred_1999 CBS domain-containing protein.
  
     0.643
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
  
 0.643
AEF93444.1
KEGG: drm:Dred_1509 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
 
     0.625
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
   
 
 0.595
AEF94246.1
KEGG: pth:PTH_1016 succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
  
     0.566
AEF94043.1
KEGG: drm:Dred_2122 hypothetical protein.
  
     0.564
AEF92968.1
KEGG: dae:Dtox_1682 thiamine biosynthesis protein ThiF; TIGRFAM: Thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding fold.
  
 
 0.529
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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