STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF94752.1Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: drm:Dred_2524 ABC transporter related; SMART: ATPase, AAA+ type, core. (498 aa)    
Predicted Functional Partners:
AEF94751.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: drm:Dred_2523 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.999
AEF94750.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: hmo:HM1_2420 ribose abc transporter, ribose-binding protein.
 
 0.997
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.996
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.985
AEF93847.1
KEGG: drm:Dred_1473 ABC-type sugar transport system periplasmic component-like protein.
 
 
 0.927
AEF94755.1
KEGG: aac:Aaci_2281 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI.
 
  
 0.924
AEF95518.1
KEGG: mta:Moth_0013 PTS fructose IIC component; TIGRFAM: Phosphotransferase system, fructose IIC component; Phosphotransferase system, fructose-specific IIB subunit; PFAM: Phosphotransferase system, EIIC.
      
 0.480
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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