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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF94851.1KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: Sporulation stage II, protein P; PFAM: Sporulation stage II, protein P. (425 aa)    
Predicted Functional Partners:
AEF94852.1
PFAM: Protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator.
     0.979
AEF94957.1
KEGG: drm:Dred_1063 hypothetical protein.
  
   
 0.817
AEF94717.1
Sporulation protein YqfD; KEGG: drm:Dred_2485 putative stage IV sporulation YqfD; TIGRFAM: Putative stage IV sporulation YqfD; PFAM: Putative stage IV sporulation YqfD.
  
   
 0.772
AEF94962.1
TIGRFAM: Sporulation stage III, protein AC; KEGG: drm:Dred_1058 stage III sporulation AC family protein.
  
  
 0.745
AEF94850.1
KEGG: drm:Dred_1157 hypothetical protein.
 
     0.723
AEF95442.1
TIGRFAM: Sporulation stage III, transcriptional regulator SpoIIID; KEGG: drm:Dred_3145 regulatory protein, DeoR.
  
  
 0.720
AEF93009.1
KEGG: drm:Dred_0117 SpoIID/LytB domain-containing protein; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
  
  
 0.719
AEF94843.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
   
 0.698
AEF94312.1
KEGG: drm:Dred_1924 hypothetical protein.
  
     0.675
AEF93010.1
KEGG: drm:Dred_0118 YabP family protein; TIGRFAM: Sporulation protein YabP; PFAM: Sporulation protein YabP/YqfC.
  
   
 0.669
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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