Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF94851.1KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: Sporulation stage II, protein P; PFAM: Sporulation stage II, protein P. (425 aa)    
Predicted Functional Partners:
AEF94852.1
PFAM: Protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator.
     0.977
AEF94717.1
Sporulation protein YqfD; KEGG: drm:Dred_2485 putative stage IV sporulation YqfD; TIGRFAM: Putative stage IV sporulation YqfD; PFAM: Putative stage IV sporulation YqfD.
  
   
 0.768
AEF94957.1
KEGG: drm:Dred_1063 hypothetical protein.
  
   
 0.765
AEF94850.1
KEGG: drm:Dred_1157 hypothetical protein.
 
     0.722
AEF93009.1
KEGG: drm:Dred_0117 SpoIID/LytB domain-containing protein; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal.
  
  
 0.712
AEF94962.1
TIGRFAM: Sporulation stage III, protein AC; KEGG: drm:Dred_1058 stage III sporulation AC family protein.
  
  
 0.697
AEF94312.1
KEGG: drm:Dred_1924 hypothetical protein.
  
     0.675
AEF93010.1
KEGG: drm:Dred_0118 YabP family protein; TIGRFAM: Sporulation protein YabP; PFAM: Sporulation protein YabP/YqfC.
  
   
 0.671
AEF92975.1
KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
     0.667
AEF92988.1
KEGG: drm:Dred_0096 hypothetical protein.
  
     0.642
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.