Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF94984.1DSBA oxidoreductase; KEGG: drm:Dred_2656 polyketide biosynthesis dithiol-disulfide isomerase-like protein; manually curated; PFAM: DSBA-like thioredoxin domain. (179 aa)    
Predicted Functional Partners:
AEF93689.1
PFAM: Glutaredoxin; KEGG: drm:Dred_1319 hypothetical protein.
    
 
 0.679
AEF94985.1
PFAM: Putitive phosphate transport regulator; KEGG: drm:Dred_2657 hypothetical protein.
       0.489
AEF94983.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.474
AEF94986.1
PFAM: Phosphate transporter; KEGG: drm:Dred_2658 phosphate transporter.
       0.458
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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