STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF94994.1DsrE family protein; PFAM: Sulphur relay, DsrE/F-like protein; KEGG: dvl:Dvul_0884 DsrE family protein. (118 aa)    
Predicted Functional Partners:
AEF94786.1
PFAM: Protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein.
  
     0.505
AEF93561.1
CoA-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Rhodanese-like; KEGG: pth:PTH_1734 NAD(FAD)-dependent dehydrogenases; SMART: Rhodanese-like.
     
 0.500
AEF94966.1
CoA-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Rhodanese-like; KEGG: drm:Dred_1054 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: Rhodanese-like.
     
 0.500
AEF94995.1
KEGG: drm:Dred_1805 hypothetical protein.
       0.484
AEF95210.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4Fe-4S binding domain; KEGG: drm:Dred_0639 methyl-viologen-reducing hydrogenase, delta subunit.
 
     0.441
AEF94083.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: drm:Dred_1650 hypothetical protein.
  
     0.427
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.