Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEF95000.1PFAM: Glycosyl transferase, group 1; KEGG: cth:Cthe_3114 glycosyl transferase, group 1. (391 aa)    
Predicted Functional Partners:
AEF94999.1
KEGG: cth:Cthe_3115 hypothetical protein.
     0.995
AEF95002.1
PFAM: Glycosidase, PH1107-related; KEGG: cth:Cthe_3112 glycosidase, PH1107-related.
 
  
 0.897
AEF95001.1
Mannose-1-phosphate guanylyltransferase; KEGG: cth:Cthe_3113 nucleotidyl transferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat.
 
 
 0.839
AEF94998.1
PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: tte:TTE0731 phosphomannomutase.
 
  
 0.766
AEF93757.1
PFAM: Methyltransferase type 12; Glycosyl transferase, family 2; KEGG: adg:Adeg_1129 glycosyl transferase family 2.
  
 
 0.703
AEF95436.1
TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: dae:Dtox_4144 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase.
  
  
 0.610
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.566
rplY-2
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
       0.487
AEF93759.1
PFAM: Glycosyl transferase, family 2; Glycosyl transferase, group 1; KEGG: glo:Glov_3374 glycosyl transferase family 2.
  
  
 0.471
AEF94996.1
TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: cce:Ccel_1179 mannose-6-phosphate isomerase, class I; PFAM: Mannose-6-phosphate isomerase, type I.
 
   
 0.441
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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