Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEF95002.1PFAM: Glycosidase, PH1107-related; KEGG: cth:Cthe_3112 glycosidase, PH1107-related. (333 aa)    
Predicted Functional Partners:
AEF95000.1
PFAM: Glycosyl transferase, group 1; KEGG: cth:Cthe_3114 glycosyl transferase, group 1.
 
  
 0.897
AEF94999.1
KEGG: cth:Cthe_3115 hypothetical protein.
 
     0.883
AEF95001.1
Mannose-1-phosphate guanylyltransferase; KEGG: cth:Cthe_3113 nucleotidyl transferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat.
  
    0.535
AEF94996.1
TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: cce:Ccel_1179 mannose-6-phosphate isomerase, class I; PFAM: Mannose-6-phosphate isomerase, type I.
 
   
 0.511
AEF94998.1
PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; KEGG: tte:TTE0731 phosphomannomutase.
 
     0.490
AEF95518.1
KEGG: mta:Moth_0013 PTS fructose IIC component; TIGRFAM: Phosphotransferase system, fructose IIC component; Phosphotransferase system, fructose-specific IIB subunit; PFAM: Phosphotransferase system, EIIC.
      
 0.408
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.