Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEF95017.1KEGG: mta:Moth_1551 N-terminal methylation. (176 aa)    
Predicted Functional Partners:
AEF95020.1
PFAM: Type II secretion system F domain; KEGG: mta:Moth_1552 type II secretion system protein.
 
  
 0.934
AEF95022.1
KEGG: dau:Daud_0991 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core.
 
 
 0.928
AEF95023.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.830
AEF95021.1
Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: adg:Adeg_1724 twitching motility protein; SMART: ATPase, AAA+ type, core.
 
  
 0.760
AEF95011.1
TIGRFAM: Type IV pilus assembly protein PilM; KEGG: drm:Dred_1029 type IV pilus assembly protein PilM.
 
  
 0.700
AEF94738.1
SMART: Beta-lactamase-like; manually curated; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; KEGG: drm:Dred_2510 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like.
  
  
 0.526
AEF95010.1
PFAM: Fimbrial assembly; KEGG: cdl:CDR20291_3347 putative membrane protein.
  
  
 0.487
AEF95018.1
Hypothetical protein; KEGG: mta:Moth_1551 N-terminal methylation.
 
    
0.475
AEF95016.1
Hypothetical protein; KEGG: mta:Moth_1551 N-terminal methylation.
      
0.470
AEF94381.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; PAS fold; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; Signal transduction response regulator, receiver domain.
   
 
 0.437
Your Current Organism:
Desulfotomaculum nigrificans
NCBI taxonomy Id: 868595
Other names: D. nigrificans CO-1-SRB, Desulfotomaculum carboxydivorans CO-1-SRB, Desulfotomaculum carboxydivorans DSM 14880, Desulfotomaculum nigrificans CO-1-SRB
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