STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB14560.1COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR005170; KEGG: tde:TDE1243 hemolysin C; PFAM: Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; SPTR: Hemolysin C; IMG reference gene:2504608609; PFAM: CBS domain; Transporter associated domain. (260 aa)    
Predicted Functional Partners:
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.905
AEB14563.1
PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: tde:TDE1240 PhoH family protein; PFAM: PhoH-like protein; SPTR: PhoH family protein; IMG reference gene:2504608612; PFAM: PhoH-like protein.
  
  
 0.851
AEB14562.1
7TM receptor with intracellular metal dependent phosphohydrolase; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR006675:IPR003607:IPR011621:IPR006674; KEGG: tde:TDE1241 HD domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Metal-dependent phosphohydrolase, 7TM intracellular domain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: HD domain protein; TIGRFAM: Uncharacterised protein family HDIG; IMG reference gene:2504608611; PFAM: HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG.
       0.809
AEB14559.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734:IPR013105:IPR001440; KEGG: tde:TDE1244 TPR domain-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR domain protein; IMG reference gene:2504608608; PFAM: Coatomer epsilon subunit; Tetratricopeptide repeat.
 
     0.774
AEB14564.1
KEGG: tde:TDE1690 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504608613.
       0.583
pgk
COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: tde:TDE1715 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; IMG reference gene:2504608607; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
    0.559
valS
Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.536
AEB14915.1
COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterPro IPR004739:IPR000991:IPR022310:IPR001674; KEGG: cpv:cgd5_4520 GMP synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase; GMP synthase, C-terminal; SPTR: Guanosine monophosphate synthase; TIGRFAM: GMP synthase, N-terminal; IMG reference gene:2504608990; PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit.
  
  
 0.482
Your Current Organism:
Treponema succinifaciens
NCBI taxonomy Id: 869209
Other names: T. succinifaciens DSM 2489, Treponema succinifaciens 6091, Treponema succinifaciens DSM 2489, Treponema succinifaciens str. DSM 2489, Treponema succinifaciens strain DSM 2489
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