STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10775.1PspC domain protein; InterPro IPR007168; KEGG: mtt:Ftrac_1338 phage shock protein C, PspC; PFAM: Phage shock domain; SPTR: PspC domain protein; IMG reference gene:2504659573; PFAM: PspC domain. (133 aa)    
Predicted Functional Partners:
AEB12771.1
COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: mrb:Mrub_0013 phage shock protein A, PspA; PFAM: PspA/IM30; SPTR: Phage shock protein A, PspA; IMG reference gene:2504661664; PFAM: PspA/IM30 family.
  
 
 0.972
AEB10774.1
Membrane protein of unknown function; COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: opr:Ocepr_0177 hypothetical protein; PFAM: Membrane protein of unknown function; SPTR: Putative uncharacterized protein; IMG reference gene:2504659572; PFAM: Membrane protein of unknown function.
  
    0.964
AEB10800.1
KEGG: sus:Acid_5580 putative transmembrane protein; SPTR: Putative transmembrane protein; IMG reference gene:2504659598; PFAM: Predicted membrane protein (DUF2154).
 
    0.592
AEB10777.1
Heme exporter protein CcmA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR005895:IPR003593:IPR003439; KEGG: opr:Ocepr_0175 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Heme exporter protein CcmA; TIGRFAM: ABC transporter, haem export, CcmA; IMG reference gene:2504659575; PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA.
  
    0.588
AEB10780.1
KEGG: opr:Ocepr_0172 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504659578.
       0.554
AEB11109.1
Histidine kinase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: opr:Ocepr_0428 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase; IMG reference gene:2504659931; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.554
AEB11334.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: opr:Ocepr_1841 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Integral membrane sensor signal transduction histidine kinase; IMG reference gene:2504660171; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.554
AEB12155.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: opr:Ocepr_1436 signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SPTR: Integral membrane sensor signal transduction histidine kinase; IMG reference gene:2504661020; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.554
AEB10776.1
Regulatory protein TetR; InterPro IPR001647; KEGG: opr:Ocepr_0176 regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2504659574; PFAM: Bacterial regulatory proteins, tetR family.
     
 0.552
AEB10778.1
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: msv:Mesil_3069 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; IMG reference gene:2504659576; PFAM: ABC-2 type transporter.
       0.546
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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