STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10853.1Tetratricopeptide TPR_2 repeat-containing protein; InterPro IPR019734:IPR001440:IPR013105:IPR011717; KEGG: opr:Ocepr_0135 tpr repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SPTR: TPR repeat-containing protein; IMG reference gene:2504659657; PFAM: Tetratricopeptide repeat. (504 aa)    
Predicted Functional Partners:
AEB10852.1
KEGG: opr:Ocepr_0134 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504659656.
     
 0.565
AEB10854.1
Protein of unknown function DUF62; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: mrb:Mrub_0668 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: Putative uncharacterized protein; IMG reference gene:2504659658; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase.
       0.489
AEB11058.1
KEGG: opr:Ocepr_0345 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504659875.
   
   0.449
AEB12288.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: opr:Ocepr_1438 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; IMG reference gene:2504661160; PFAM: Peptidase family M23.
   
   0.449
rplI
50S ribosomal protein L9; Binds to the 23S rRNA.
       0.421
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.409
AEB10850.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.408
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.408
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.