STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10856.1COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: msv:Mesil_1073 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase; IMG reference gene:2504659660; PFAM: Fatty acid desaturase. (358 aa)    
Predicted Functional Partners:
surE
Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.773
AEB12866.1
TPR repeat-containing protein; COGs: COG2909 ATP-dependent transcriptional regulator protein; KEGG: msv:Mesil_2325 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; IMG reference gene:2504661763.
  
     0.581
AEB12555.1
COGs: COG3307 Lipid A core - O-antigen ligase; InterPro IPR007016; KEGG: msv:Mesil_2737 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase; IMG reference gene:2504661436; PFAM: O-Antigen ligase.
  
     0.525
AEB10857.1
Peptidase S54, rhomboid domain protein; COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: ttj:TTHA1474 hypothetical protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Hypothetical membrane spanning protein; IMG reference gene:2504659661; PFAM: Rhomboid family.
       0.505
AEB11099.1
Glycosyl transferase family 19; COGs: COG0763 Lipid A disaccharide synthetase; KEGG: msv:Mesil_0867 glycosyl transferase family 19; SPTR: Glycosyl transferase family 19; IMG reference gene:2504659919.
 
     0.491
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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