STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10945.1InterPro IPR014082; KEGG: msv:Mesil_0710 CRISPR-associated protein, TIGR02710 family; SPTR: CRISPR-associated protein, TIGR02710 family; TIGRFAM: CRISPR-associated protein, Cas02710; IMG reference gene:2504659753; PFAM: CRISPR-associated protein (Cas_Cas02710); TIGRFAM: CRISPR-associated protein, TIGR02710 family. (397 aa)    
Predicted Functional Partners:
AEB10939.1
CRISPR-associated protein Cas6; COGs: COG5551 conserved hypothetical protein; InterPro IPR010156:IPR019267; KEGG: tth:TTC1927 hypothetical protein; PFAM: Protein of unknown function DUF2276; SPTR: Hypothetical conserved protein; TIGRFAM: CRISPR-associated protein, Cas6; IMG reference gene:2504659747; PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated endoribonuclease Cas6.
 
     0.884
AEB10941.1
KEGG: msv:Mesil_0702 CRISPR-associated RAMP protein, Csm4 family; SPTR: CRISPR-associated RAMP protein, Csm4 family; IMG reference gene:2504659749.
 
     0.838
AEB10944.1
CRISPR-associated protein, Csm1 family; COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); InterPro IPR013408; KEGG: mrb:Mrub_0215 Csm1 family CRISPR-associated protein; SPTR: CRISPR-associated protein, Csm1 family; TIGRFAM: CRISPR-associated protein Csm1; IMG reference gene:2504659752; TIGRFAM: CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE.
 
     0.796
AEB10946.1
KEGG: ttj:TTHB152 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504659754.
       0.773
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.752
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.751
AEB12811.1
Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: tpe:Tpen_1284 ankyrin; PFAM: Ankyrin repeat; SPTR: Ankyrin; IMG reference gene:2504661705; PFAM: Ankyrin repeat.
   
 0.733
AEB10942.1
CRISPR-associated RAMP protein, Csm3 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013412:IPR005537; KEGG: mrb:Mrub_0217 Csm3 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Csm3 family; TIGRFAM: CRISPR-associated RAMP Csm3; IMG reference gene:2504659750; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm3.
 
     0.697
AEB11719.1
COGs: COG2378 transcriptional regulator protein; InterPro IPR013196; KEGG: ttj:TTHB186 putative transcriptional regulator; SPTR: Putative transcriptional regulator; IMG reference gene:2504660564; PFAM: HTH domain.
  
    0.695
AEB11099.1
Glycosyl transferase family 19; COGs: COG0763 Lipid A disaccharide synthetase; KEGG: msv:Mesil_0867 glycosyl transferase family 19; SPTR: Glycosyl transferase family 19; IMG reference gene:2504659919.
  
     0.691
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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