STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB11338.1KEGG: tth:TTC1974 hypothetical protein; SPTR: Hypothetical conserved protein; IMG reference gene:2504660175. (116 aa)    
Predicted Functional Partners:
AEB11337.1
Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000644:IPR000160; KEGG: tth:TTC1973 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; Cystathionine beta-synthase, core; SPTR: Cbs domain proteins; TIGRFAM: Diguanylate cyclase, predicted; IMG reference gene:2504660174; PFAM: CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
     0.923
AEB11339.1
Beta-lactamase domain protein; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001279:IPR011108; KEGG: opr:Ocepr_1840 RNA-metabolising metallo-beta-lactamase; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2504660176; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.
       0.524
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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