STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB11436.1Protein of unknown function DUF1684; COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: kra:Krad_4200 hypothetical protein; PFAM: Protein of unknown function DUF1684; SPTR: Putative uncharacterized protein; IMG reference gene:2504660274; PFAM: Protein of unknown function (DUF1684). (203 aa)    
Predicted Functional Partners:
AEB11434.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: opr:Ocepr_1770 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; IMG reference gene:2504660272; PFAM: Glycosyl transferases group 1.
       0.773
AEB11435.1
Sucrose phosphorylase; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047:IPR013739; KEGG: opr:Ocepr_1771 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Beta-galactosidase C-terminal; PRIAM: Sucrose phosphorylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase catalytic region; IMG reference gene:2504660273; PFAM: Alpha amylase, catalytic domain.
       0.773
AEB11432.1
ABC-type transporter, integral membrane subunit; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: opr:Ocepr_1768 carbohydrate ABC transporter membrane protein 1, cut1 family; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2504660270; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.701
AEB11433.1
ABC-type transporter, integral membrane subunit; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: tra:Trad_0949 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2504660271; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.701
AEB11431.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: opr:Ocepr_1767 carbohydrate ABC transporter substrate-binding protein, cut1 family; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2504660269; PFAM: Bacterial extracellular solute-binding protein.
       0.550
AEB11430.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: opr:Ocepr_1766 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2504660268; PFAM: Bacterial regulatory proteins, lacI family; family.
       0.508
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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