Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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[Homology]
Score
AEB11551.1Hypothetical protein; IMG reference gene:2504660392. (382 aa)    
Predicted Functional Partners:
AEB11549.1
KEGG: msv:Mesil_2608 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504660389.
       0.425
AEB11550.1
Protein of unknown function DUF420; COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: ttj:TTHA1193 hypothetical protein; PFAM: Protein of unknown function DUF420; SPTR: Putative uncharacterized protein; IMG reference gene:2504660390; PFAM: Protein of unknown function (DUF420).
       0.425
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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