STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEB11710.1Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: opr:Ocepr_0813 type II secretion system f domain; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; IMG reference gene:2504660555; PFAM: Bacterial type II secretion system protein F domain. (406 aa)    
Predicted Functional Partners:
AEB12837.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482; KEGG: opr:Ocepr_0126 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SPTR: Type II secretion system protein E; IMG reference gene:2504661732; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
 
 0.958
AEB10911.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593:IPR007831:IPR001482; KEGG: opr:Ocepr_0531 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Putative ATPase; IMG reference gene:2504659718; PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein.
 
 0.940
AEB12269.1
COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: opr:Ocepr_1388 type IV pilus assembly protein PilM; SPTR: Type IV pilus assembly protein PilM; TIGRFAM: Type IV pilus assembly protein PilM; IMG reference gene:2504661140; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM.
 
 
 
 0.896
AEB12844.1
Prepilin peptidase; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: opr:Ocepr_0525 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; PRIAM: Prepilin peptidase; SPTR: Peptidase A24A domain protein; IMG reference gene:2504661739; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family.
 
  
 0.862
AEB10997.1
Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR003593:IPR001482; KEGG: opr:Ocepr_0453 twitching motility protein; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: Pili retraction protein pilT; TIGRFAM: Pilus retraction protein PilT; IMG reference gene:2504659807; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
 
  
 0.803
AEB12836.1
Twitching motility protein; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR003593:IPR006321:IPR001482; KEGG: opr:Ocepr_0127 pilus retraction atpase PilT; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: Twitching motility protein; TIGRFAM: Pilus retraction protein PilT; IMG reference gene:2504661731; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
  
 0.803
AEB12966.1
DNA internalization-related competence protein ComEC/Rec2; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004477:IPR001279:IPR004797; KEGG: msv:Mesil_3192 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; IMG reference gene:2504661868; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA i [...]
   
  
 0.714
AEB12371.1
Hypothetical protein; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902; KEGG: opr:Ocepr_2072 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504661245; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.699
AEB10916.1
Hypothetical protein; InterPro IPR012902; KEGG: opr:Ocepr_0526 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504659723; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
  
 0.683
AEB11708.1
Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.638
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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