STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB11833.1KEGG: opr:Ocepr_0993 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504660682. (439 aa)    
Predicted Functional Partners:
AEB11832.1
KEGG: msv:Mesil_1664 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504660681.
       0.774
ruvC
Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.470
AEB11835.1
UPF0082 protein yeeN; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: opr:Ocepr_0995 hypothetical protein; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein TTHA0821; TIGRFAM: Protein of unknown function DUF28; IMG reference gene:2504660684; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family.
       0.470
AEB11831.1
KEGG: msv:Mesil_1663 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504660680.
       0.445
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.