Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEB11940.1 | AEB11941.1 | Marky_1200 | Marky_1201 | KEGG: opr:Ocepr_2102 hypothetical protein; IMG reference gene:2504660794. | Hypothetical protein; IMG reference gene:2504660795. | 0.470 |
AEB11941.1 | AEB11940.1 | Marky_1201 | Marky_1200 | Hypothetical protein; IMG reference gene:2504660795. | KEGG: opr:Ocepr_2102 hypothetical protein; IMG reference gene:2504660794. | 0.470 |
AEB11941.1 | AEB11944.1 | Marky_1201 | Marky_1204 | Hypothetical protein; IMG reference gene:2504660795. | Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: opr:Ocepr_1105 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2504660798; PFAM: Metallo-beta-lactamase superfamily. | 0.488 |
AEB11941.1 | trpA | Marky_1201 | Marky_1203 | Hypothetical protein; IMG reference gene:2504660795. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.495 |
AEB11941.1 | trpB | Marky_1201 | Marky_1202 | Hypothetical protein; IMG reference gene:2504660795. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.495 |
AEB11944.1 | AEB11941.1 | Marky_1204 | Marky_1201 | Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: opr:Ocepr_1105 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2504660798; PFAM: Metallo-beta-lactamase superfamily. | Hypothetical protein; IMG reference gene:2504660795. | 0.488 |
AEB11944.1 | trpA | Marky_1204 | Marky_1203 | Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: opr:Ocepr_1105 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2504660798; PFAM: Metallo-beta-lactamase superfamily. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.795 |
AEB11944.1 | trpB | Marky_1204 | Marky_1202 | Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: opr:Ocepr_1105 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2504660798; PFAM: Metallo-beta-lactamase superfamily. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.795 |
trpA | AEB11941.1 | Marky_1203 | Marky_1201 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Hypothetical protein; IMG reference gene:2504660795. | 0.495 |
trpA | AEB11944.1 | Marky_1203 | Marky_1204 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: opr:Ocepr_1105 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2504660798; PFAM: Metallo-beta-lactamase superfamily. | 0.795 |
trpA | trpB | Marky_1203 | Marky_1202 | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.999 |
trpB | AEB11941.1 | Marky_1202 | Marky_1201 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Hypothetical protein; IMG reference gene:2504660795. | 0.495 |
trpB | AEB11944.1 | Marky_1202 | Marky_1204 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Beta-lactamase domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: opr:Ocepr_1105 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2504660798; PFAM: Metallo-beta-lactamase superfamily. | 0.795 |
trpB | trpA | Marky_1202 | Marky_1203 | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.999 |