STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12030.1KEGG: opr:Ocepr_1909 integral membrane sensor signal transduction histidine kinase; IMG reference gene:2504660884. (240 aa)    
Predicted Functional Partners:
AEB12029.1
ABC transporter substrate binding protein; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: opr:Ocepr_1910 hypothetical protein; PFAM: ABC transporter substrate binding protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2504660883; PFAM: ABC transporter substrate binding protein.
       0.773
AEB12031.1
KEGG: msv:Mesil_3162 transposase IS4 family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504660885.
       0.732
AEB12028.1
COGs: COG2863 Cytochrome c553; InterPro IPR003088; KEGG: dge:Dgeo_1469 cytochrome c, class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome C4, putative; IMG reference gene:2504660882; PFAM: Cytochrome c.
       0.545
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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