STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12146.1Zinc/iron permease; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: opr:Ocepr_0960 zinc/iron permease; PFAM: Zinc/iron permease; SPTR: Putative divalent heavy-metal cation transporter; IMG reference gene:2504661010; PFAM: ZIP Zinc transporter. (246 aa)    
Predicted Functional Partners:
AEB12147.1
Transcriptional regulator, HxlR family; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577:IPR001845; KEGG: opr:Ocepr_0959 transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, HxlR family; IMG reference gene:2504661011; PFAM: HxlR-like helix-turn-helix.
       0.620
AEB12148.1
KEGG: opr:Ocepr_0958 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504661012.
       0.441
AEB12420.1
Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.427
AEB12154.1
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.411
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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