STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12296.1ABC-type transporter, integral membrane subunit; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: opr:Ocepr_0738 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2504661168; PFAM: Binding-protein-dependent transport system inner membrane component. (468 aa)    
Predicted Functional Partners:
AEB12295.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR013563:IPR010066:IPR003593; KEGG: msv:Mesil_1370 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:2504661167; [...]
  
 0.982
AEB12297.1
ABC-type transporter, integral membrane subunit; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: opr:Ocepr_0737 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2504661169; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.976
AEB12294.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR010066:IPR003593; KEGG: opr:Ocepr_0740 oligopeptide/dipeptide ABC transporter, atpase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide transport ATP-binding protein appF; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:250466116 [...]
  
 0.973
AEB12298.1
COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: opr:Ocepr_0736 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Extracellular solute-binding protein family 5; IMG reference gene:2504661170; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
 
 0.957
AEB10787.1
ABC-type transporter, integral membrane subunit; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: opr:Ocepr_2082 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2504659585; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.882
AEB12363.1
ABC-type transporter, integral membrane subunit; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: opr:Ocepr_1706 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Dipeptide transport system permease protein dppB; IMG reference gene:2504661237; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.882
AEB12959.1
ABC-type transporter, integral membrane subunit; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_2417 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2504661860; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.878
AEB11755.1
ABC-type transporter, integral membrane subunit; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: opr:Ocepr_0878 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2504660601; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.877
AEB10788.1
COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: opr:Ocepr_2083 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Extracellular solute-binding protein family 5; IMG reference gene:2504659586; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
 
 0.778
AEB12364.1
COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: opr:Ocepr_1707 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Peptide ABC transporter, peptide-binding protein; IMG reference gene:2504661238; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
 
 0.710
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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