STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12641.1CRISPR-associated protein, Crm2 family; COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); InterPro IPR013407; KEGG: tth:TT_P0115 hypothetical protein; SPTR: CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Crm2; IMG reference gene:2504661524; PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B. (589 aa)    
Predicted Functional Partners:
AEB12636.1
CRISPR-associated RAMP protein, Cmr6 family; COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR010172:IPR005537; KEGG: ttj:TTHB165 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated protein, TM1791; IMG reference gene:2504661519; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6.
 
 
 
 0.990
AEB12638.1
CRISPR-associated RAMP protein, Cmr4 family; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013410:IPR005537; KEGG: tth:TT_P0118 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Hypothetical conserved protein; TIGRFAM: CRISPR-associated RAMP Cmr4; IMG reference gene:2504661521; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4.
 
 
 
 0.990
AEB12640.1
CRISPR-associated protein, Cmr3; COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR019117; KEGG: ttj:TTHB161 hypothetical protein; PFAM: CRISPR-associated protein, Cmr3; SPTR: Putative uncharacterized protein TTHB161; IMG reference gene:2504661523; PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr3.
 
 
 
 0.990
AEB12639.1
COGs: COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR007522:IPR005537; KEGG: ttj:TTHB162 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein TTHB162; TIGRFAM: CRISPR-associated protein TM1795 family, N-terminal; IMG reference gene:2504661522; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr1.
 
 
 
 0.969
AEB12637.1
CRISPR-associated protein, Cmr5 family; InterPro IPR010160; KEGG: ttj:TTHB164 hypothetical protein; PFAM: CRISPR-associated protein, Cmr5; SPTR: Putative uncharacterized protein TTHB164; TIGRFAM: CRISPR-associated protein, Cmr5; IMG reference gene:2504661520; PFAM: CRISPR-associated protein (Cas_Cmr5).
   
 
 0.949
AEB10943.1
InterPro IPR010149; KEGG: ttj:TTHB148 hypothetical protein; PFAM: CRISPR-associated protein, TM1810 C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, TM1810 C-terminal; IMG reference gene:2504659751; PFAM: Protein of unknown function (DUF310); TIGRFAM: CRISPR type III-A/MTUBE-associated protein Csm2.
  
 
 0.858
AEB10942.1
CRISPR-associated RAMP protein, Csm3 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013412:IPR005537; KEGG: mrb:Mrub_0217 Csm3 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Csm3 family; TIGRFAM: CRISPR-associated RAMP Csm3; IMG reference gene:2504659750; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm3.
  
 
 0.836
AEB10940.1
InterPro IPR010173:IPR005537; KEGG: mrb:Mrub_0219 Csm5 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Csm5 family; TIGRFAM: CRISPR-associated protein, TM1807; IMG reference gene:2504659748; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm5.
  
 
 0.835
AEB10941.1
KEGG: msv:Mesil_0702 CRISPR-associated RAMP protein, Csm4 family; SPTR: CRISPR-associated RAMP protein, Csm4 family; IMG reference gene:2504659749.
  
 
 0.835
AEB12642.1
CRISPR-associated protein DxTHG motif protein; InterPro IPR013383:IPR011742; KEGG: csc:Csac_0044 hypothetical protein; PFAM: CRISPR-associated protein, TM1812; SPTR: CRISPR-associated protein DxTHG motif; TIGRFAM: CRISPR-associated protein DxTHG, conserved site; IMG reference gene:2504661525; PFAM: CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated protein, TM1812 family.
     
 0.645
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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