STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12704.1COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: opr:Ocepr_0638 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; IMG reference gene:2504661588; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF. (654 aa)    
Predicted Functional Partners:
AEB12702.1
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
 
  
 0.984
AEB12701.1
Cytochrome c class I; InterPro IPR019734:IPR001440:IPR003088; KEGG: mrb:Mrub_0843 TPR repeat-containing protein; PFAM: Cytochrome c, class I; Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein; IMG reference gene:2504661585; PFAM: Cytochrome c.
  
 
 0.970
AEB12703.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: ttj:TTHA1403 cytochrome c biogenesis protein, thiol:disulfide interchange protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Cytochrome c biogenesis protein, thiol:disulfide interchange protein; IMG reference gene:2504661587; PFAM: AhpC/TSA family; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily.
     0.954
ccmE
Cytochrome c-type biogenesis protein ccmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
 
 0.911
AEB11206.1
Cytochrome c assembly protein; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: opr:Ocepr_0635 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; IMG reference gene:2504660038; PFAM: Cytochrome C assembly protein.
 
  
 0.876
AEB11205.1
COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: opr:Ocepr_0631 cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; SPTR: Cytochrome c-type biogenesis protein CcmB; IMG reference gene:2504660037; PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB.
 
  
 0.862
AEB12918.1
Redoxin domain protein; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740; KEGG: ttj:TTHA0840 thiol:disulfide interchange protein; PFAM: Redoxin; SPTR: Thiol:disulfide interchange protein tlpA; IMG reference gene:2504661818; PFAM: Prolipoprotein diacylglyceryl transferase; Redoxin.
 
  
 0.725
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
   
 0.484
AEB12910.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311; KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; IMG reference gene:2504661810.
  
  
 0.445
AEB12705.1
NADP-dependent oxidoreductase domain protein; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: ttj:TTHA0027 potassium channel, beta subunit (oxidoreductase); PFAM: NADP-dependent oxidoreductase domain; SPTR: Oxidoreductase; IMG reference gene:2504661589; PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal.
       0.432
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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