STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12737.1Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR002482:IPR018392:IPR016047; KEGG: mrb:Mrub_2495 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidase M23; IMG reference gene:2504661624; PFAM: Peptidase family M23; LysM domain. (344 aa)    
Predicted Functional Partners:
AEB11328.1
Penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264:IPR001460:IPR011816; KEGG: opr:Ocepr_1848 peptidoglycan glycosyltransferase; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative transpeptidase; TIGRFAM: Penicillin-binding protein 1A; IMG reference gene:2504660164; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
  
   
 0.647
AEB12288.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: opr:Ocepr_1438 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; IMG reference gene:2504661160; PFAM: Peptidase family M23.
 
   
 0.631
AEB12736.1
Hypothetical protein; KEGG: mrb:Mrub_2566 diguanylate cyclase/phosphodiesterase with GAF sensor; SPTR: Diguanylate cyclase/phosphodiesterase with GAF sensor; IMG reference gene:2504661623.
       0.564
AEB12738.1
KEGG: lbf:LBF_2720 putative lipoprotein; SPTR: Putative uncharacterized protein; IMG reference gene:2504661625.
       0.538
AEB12739.1
Hypothetical protein; IMG reference gene:2504661626.
       0.527
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
 
0.495
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
   
 0.477
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
 
 0.454
AEB11216.1
Penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460:IPR017790; KEGG: opr:Ocepr_0648 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative transpeptidase, cell division protein ftsI; TIGRFAM: Penicillin-binding protein 2; IMG reference gene:2504660048; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-b [...]
 
   
 0.429
AEB12178.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460; KEGG: opr:Ocepr_1267 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; IMG reference gene:2504661046; PFAM: Penicillin binding protein transpeptidase domain.
 
   
 0.420
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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