STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12772.1KEGG: msv:Mesil_0018 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504661665. (153 aa)    
Predicted Functional Partners:
AEB12773.1
KEGG: opr:Ocepr_1961 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504661666.
       0.682
AEB12771.1
COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: mrb:Mrub_0013 phage shock protein A, PspA; PFAM: PspA/IM30; SPTR: Phage shock protein A, PspA; IMG reference gene:2504661664; PFAM: PspA/IM30 family.
       0.668
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.624
AEB12775.1
InterPro IPR000182; KEGG: mrb:Mrub_0059 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase; IMG reference gene:2504661668; PFAM: Acetyltransferase (GNAT) family.
       0.554
AEB12776.1
InterPro IPR005079; KEGG: chl:Chy400_2318 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; IMG reference gene:2504661669; PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
       0.554
AEB12770.1
COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006091:IPR006090; KEGG: opr:Ocepr_0602 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; SPTR: Acyl-CoA dehydrogenase aidB; IMG reference gene:2504661663; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.
       0.536
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
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