STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60448.1Hypothetical protein; InterPro IPR019734:IPR003107; KEGG: sta:STHERM_c01770 hypothetical protein; SPTR: Putative uncharacterized protein. (964 aa)    
Predicted Functional Partners:
AEJ61303.1
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: sta:STHERM_c10060 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70.
   
 
 0.659
AEJ62124.1
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: sta:STHERM_c18250 hypothetical protein; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70.
   
 
 0.659
AEJ60447.1
KEGG: sta:STHERM_c01760 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.619
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.552
AEJ60427.1
KEGG: sta:STHERM_c01520 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.496
AEJ60429.1
KEGG: sta:STHERM_c01540 BNR domain-containing protein; SPTR: BNR domain-containing protein.
    
 
 0.496
AEJ60667.1
KEGG: sta:STHERM_c04180 alpha-L-fucosidase 2 precursor; SPTR: Alpha-L-fucosidase.
    
 
 0.496
AEJ60825.1
KEGG: sta:STHERM_c05230 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.496
AEJ61236.1
KEGG: sta:STHERM_c09370 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.496
AEJ61349.1
KEGG: sta:STHERM_c10500 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.496
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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