STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60502.1Auxin Efflux Carrier; PFAM: Membrane transport protein; COGs: COG0679 permease; InterPro IPR004776; KEGG: sta:STHERM_c02320 efflux carrier; PFAM: Auxin efflux carrier; SPTR: Auxin Efflux Carrier. (307 aa)    
Predicted Functional Partners:
AEJ60500.1
KEGG: sta:STHERM_c02300 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.664
AEJ60501.1
KEGG: sta:STHERM_c02310 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.664
AEJ60917.1
Malic protein NAD-binding protein; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302; KEGG: sta:STHERM_c06230 hypothetical protein; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SPTR: Malic protein NAD-binding.
  
  
 0.652
AEJ60503.1
Hypothetical protein.
       0.550
AEJ60499.1
KEGG: sta:STHERM_c02290 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.482
AEJ60497.1
Protein of unknown function DUF1121; PFAM: Uncharacterised ACR, YkgG family COG1556; InterPro IPR009501; KEGG: sta:STHERM_c02270 hypothetical protein; PFAM: Protein of unknown function DUF1121; SPTR: Putative uncharacterized protein.
 
     0.413
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.