Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60558.1KEGG: sta:STHERM_c02880 hypothetical protein; SPTR: Putative uncharacterized protein. (433 aa)    
Predicted Functional Partners:
AEJ60557.1
KEGG: sta:STHERM_c02870 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.733
AEJ60559.1
KEGG: sta:STHERM_c02890 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.621
AEJ60556.1
KEGG: sta:STHERM_c02860 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.565
AEJ60555.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.536
AEJ60560.1
KEGG: sta:STHERM_c02900 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.497
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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