STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60595.1ABC-type transporter, integral membrane subunit; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: sta:STHERM_c03260 transporter; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator. (401 aa)    
Predicted Functional Partners:
AEJ60593.1
Transporter; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein; COGs: COG4213 ABC-type xylose transport system periplasmic component; KEGG: sta:STHERM_c03240 transporter; SPTR: D-xylose ABC transporter (Substrate-binding protein).
 
 0.985
AEJ60594.1
PFAM: ABC transporter; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sta:STHERM_c03250 transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Xylose ABC transporter ATP-binding protein.
  
 0.944
AEJ62355.1
Periplasmic binding protein/LacI transcriptional regulator; PFAM: family; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: sta:STHERM_c20560 ribose ABC transporter; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator.
  
 0.774
AEJ60709.1
Periplasmic binding protein/LacI transcriptional regulator; PFAM: family; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: pjd:Pjdr2_5327 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator.
  
 0.749
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.748
rbsA-2
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.741
rbsA-3
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.741
AEJ60591.1
PAS/PAC sensor signal transduction histidine kinase; PFAM: ABC transporter; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; COGs: COG1129 ABC-type sugar transport system ATPase component; InterProIPR003593:IPR000014:IPR003661:IPR003594:IPR 003439:IPR013767; KEGG: sta:STHERM_c03220 sensory histidine kinase in two-component regulatory system with AtoC; PFAM: ATP-binding region, ATPase-like; ABC transporter-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding regi [...]
 
  
 0.539
AEJ60596.1
KEGG: sta:STHERM_c03270 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.498
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.434
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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