STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60598.1Methicillin resistance protein; PFAM: FemAB family; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: sta:STHERM_c03290 protein FemA; PFAM: Methicillin resistance protein; SPTR: Methicillin resistance protein. (329 aa)    
Predicted Functional Partners:
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.815
AEJ60599.1
Hypothetical protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG3391 conserved hypothetical protein; KEGG: sta:STHERM_c03300 hypothetical protein; SPTR: Surface antigen OrfC lipoprotein.
       0.757
AEJ60596.1
KEGG: sta:STHERM_c03270 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.661
AEJ60595.1
ABC-type transporter, integral membrane subunit; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4214 ABC-type xylose transport system permease component; InterPro IPR001851; KEGG: sta:STHERM_c03260 transporter; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator.
       0.434
AEJ60594.1
PFAM: ABC transporter; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sta:STHERM_c03250 transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Xylose ABC transporter ATP-binding protein.
       0.404
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.