STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60645.1PFAM: Glycosyl hydrolase family 53; COGs: COG3867 Arabinogalactan endo-1 4-beta-galactosidase; InterPro IPR011683; KEGG: sta:STHERM_c03950 arabinogalactan endo-1,4-beta-galactosidase; PFAM: Glycosyl hydrolase 53; SPTR: Arabinogalactan endo-1,4-beta-galactosidase. (384 aa)    
Predicted Functional Partners:
AEJ60657.1
Glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: cth:Cthe_1398 cellulosome enzyme, dockerin type I; PFAM: BNR repeat; SPTR: Cellulosome enzyme, dockerin type I; manually curated.
 
    0.752
AEJ60991.1
PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: sta:STHERM_c15090 endo-1,4-beta-xylanase B; PFAM: Glycoside hydrolase, family 10; SMART: Glycoside hydrolase, family 10; SPTR: Endo-1,4-beta-xylanase.
  
     0.745
AEJ62197.1
PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: sta:STHERM_c18930 endo-1,4-beta-xylanase B precursor; PFAM: Glycoside hydrolase, family 10; SMART: Glycoside hydrolase, family 10; SPTR: Endo-1,4-beta-xylanase.
  
     0.744
AEJ61584.1
PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: sta:STHERM_c08530 beta-1,4-xylanase; PFAM: Glycoside hydrolase, family 10; SMART: Glycoside hydrolase, family 10; SPTR: Endo-1,4-beta-xylanase.
  
     0.732
AEJ60658.1
PFAM: Glycosyl hydrolase family 12; InterPro IPR002594; KEGG: sta:STHERM_c04060 glycosyl hydrolase family 12 protein, TPS linker, domain X; PFAM: Glycoside hydrolase, family 12; SPTR: Glycoside hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
  
 0.711
AEJ62098.1
PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: sta:STHERM_c17680 xylanase; PFAM: Glycoside hydrolase, family 10; SMART: Glycoside hydrolase, family 10; SPTR: Glycoside hydrolase family 10.
  
   
 0.707
AEJ62193.1
PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103; KEGG: sta:STHERM_c18890 carbohydrate binding family 6; PFAM: Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase family 2, TIM barrel; SPTR: Glycoside hydrolase family 2 sugar binding.
   
 0.637
AEJ61028.1
PFAM: Glycosyl hydrolases family 43; InterPro IPR006710; KEGG: sta:STHERM_c14740 hypothetical protein; PFAM: Glycoside hydrolase, family 43; SPTR: Alpha-N-arabinofuranosidase.
 
   
 0.628
AEJ60650.1
PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: sta:STHERM_c03990 glycoside hydrolase, family 31; PFAM: Glycoside hydrolase, family 31; SPTR: Glycoside hydrolase family 31.
 
  
 0.586
AEJ61029.1
Hypothetical protein; PFAM: Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; KEGG: sta:STHERM_c14730 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.581
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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