STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60905.1PFAM: Family of unknown function (DUF438); Domain of unknown function (DUF1858); Hemerythrin HHE cation binding domain; COGs: COG2461 conserved hypothetical protein; InterPro IPR015077:IPR007380:IPR012312; KEGG: sta:STHERM_c06110 hypothetical protein; PFAM: Protein of unknown function DUF438; Domain of unknown function DUF1858; Haemerythrin/HHE cation-binding motif; SPTR: Putative uncharacterized protein. (489 aa)    
Predicted Functional Partners:
AEJ60904.1
Cupin 2 conserved barrel domain protein; PFAM: Cupin domain; InterPro IPR013096; KEGG: sta:STHERM_c06100 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein.
 
     0.677
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.