STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60943.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: sta:STHERM_c06490 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase. (243 aa)    
Predicted Functional Partners:
AEJ60944.1
PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: sta:STHERM_c06500 hypothetical protein; PFAM: AzlC-like; SPTR: AzlC family protein.
       0.538
AEJ60945.1
PFAM: Branched-chain amino acid transport protein (AzlD); InterPro IPR008407; KEGG: sta:STHERM_c06510 hypothetical protein; PFAM: Branched-chain amino acid transport; SPTR: Branched-chain amino acid transport.
       0.538
AEJ60508.1
PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: sta:STHERM_c02380 polysaccharide deacetylase family protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase.
  
     0.506
AEJ62365.1
PFAM: Cellulase (glycosyl hydrolase family 5); COGs: COG2730 Endoglucanase; InterPro IPR001547; KEGG: sta:STHERM_c20620 cellulase, glycosyl hydrolase family 5, TPS linker, domain X; PFAM: Glycoside hydrolase, family 5; SPTR: Glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.447
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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