STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60963.1PFAM: Protein of unknown function (DUF503); COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: sta:STHERM_c06690 hypothetical protein; PFAM: Protein of unknown function DUF503; SPTR: Putative uncharacterized protein. (95 aa)    
Predicted Functional Partners:
AEJ60962.1
PFAM: Ion transport protein; KEGG: sta:STHERM_c06680 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.808
AEJ60961.1
KEGG: sta:STHERM_c06660 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.798
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
  
 0.645
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
  
 0.596
AEJ60960.1
KEGG: sta:STHERM_c06670 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.567
AEJ60958.1
PFAM: FecR protein; KEGG: sta:STHERM_c06640 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.473
AEJ60959.1
KEGG: sta:STHERM_c06650 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.463
AEJ62169.1
KEGG: sta:STHERM_c18670 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.400
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.