STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ60973.1KEGG: adg:Adeg_1772 hypothetical protein; SPTR: Putative uncharacterized protein. (263 aa)    
Predicted Functional Partners:
AEJ60972.1
TIGRFAM: CRISPR type I-D/CYANO-associated protein Csc2; InterPro IPR017574; KEGG: adg:Adeg_1773 hypothetical protein; SPTR: CRISPR-associated protein Csc2; TIGRFAM: CRISPR-associated protein Csc2.
       0.622
AEJ60971.1
PFAM: Spore germination protein GerPC; KEGG: adg:Adeg_1774 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.607
AEJ60969.1
KEGG: adg:Adeg_1776 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.587
AEJ60970.1
KEGG: adg:Adeg_1775 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.587
AEJ60968.1
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterPro IPR011545:IPR001650:IPR014001; KEGG: adg:Adeg_1777 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein.
       0.579
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.