STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61035.1PFAM: Bacterial regulatory protein, arsR family; COGs: COG4189 transcriptional regulator protein; InterPro IPR001845; KEGG: sta:STHERM_c14670 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family. (313 aa)    
Predicted Functional Partners:
AEJ61025.1
alpha-L-arabinofuranosidase domain protein; PFAM: Alpha-L-arabinofuranosidase C-terminus; COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: sta:STHERM_c14770 alpha-N-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal; SPTR: Alpha-N-arabinofuranosidase.
 
     0.679
AEJ61613.1
PFAM: Bacterial extracellular solute-binding protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sta:STHERM_c08220 extracellular solute-binding protein, family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1.
  
     0.483
AEJ61036.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: gym:GYMC10_1361 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Extracellular solute-binding protein family 5.
       0.469
AEJ61026.1
alpha-L-arabinofuranosidase domain protein; PFAM: Alpha-L-arabinofuranosidase C-terminus; COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: sta:STHERM_c14760 alpha-N-arabinofuranosidase 2; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal; SPTR: Alpha-L-arabinofuranosidase domain protein.
 
     0.468
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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