STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61108.1KEGG: sta:STHERM_c13240 hypothetical protein; SPTR: Putative uncharacterized protein. (126 aa)    
Predicted Functional Partners:
AEJ61107.1
MULE transposase, conserved domain-containing protein; PFAM: Transposase, Mutator family; COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR018289; KEGG: sta:STHERM_c22570 hypothetical protein; PFAM: MULE transposase, conserved domain; SPTR: MULE transposase, conserved domain.
       0.484
AEJ61105.1
PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: sta:STHERM_c13260 hypothetical protein; PFAM: Aminotransferase, class I/II; SPTR: 8-amino-7-oxononanoate synthase.
       0.412
AEJ61106.1
PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814; KEGG: sta:STHERM_c13250 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; SPTR: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; manually curated; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.412
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
       0.401
AEJ61103.1
Methyltransferase type 11; PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; InterPro IPR013216; KEGG: sta:STHERM_c13280 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.
       0.401
AEJ61104.1
PFAM: Protein of unknown function (DUF452); COGs: COG2830 conserved hypothetical protein; InterPro IPR007398; KEGG: sta:STHERM_c13270 hypothetical protein; PFAM: Protein of unknown function DUF452; SPTR: Putative uncharacterized protein.
       0.401
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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