Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rnfDElectron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (342 aa)    
Predicted Functional Partners:
rnfE
Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.993
rnfG-2
Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.993
rnfC
Electron transport complex protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
 
 0.993
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.990
rnfA-2
Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.988
AEJ60742.1
PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterPro IPR011538; KEGG: sta:STHERM_c04410 transporter; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; SPTR: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
 
 
 0.973
AEJ60745.1
PFAM: Rnf-Nqr subunit, membrane protein; COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; KEGG: sta:STHERM_c04440 hypothetical protein; SPTR: Electron transport complex RsxE subunit; Belongs to the NqrDE/RnfAE family.
 
 
 0.973
rnfG
FMN-binding domain protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.907
AEJ60746.1
PFAM: Rnf-Nqr subunit, membrane protein; KEGG: sta:STHERM_c04450 hypothetical protein; SPTR: Electron transport complex protein RnfA.
 
 
 0.827
rnfA
RnfA-Nqr electron transport subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
   
 0.802
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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