STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61263.1Hypothetical protein; PFAM: Sporulation and spore germination; KEGG: sta:STHERM_c09660 hypothetical protein; SPTR: Putative uncharacterized protein. (171 aa)    
Predicted Functional Partners:
AEJ61261.1
ATP-grasp fold domain protein, DUF201-type; PFAM: ATP-grasp domain; COGs: COG0439 Biotin carboxylase; InterPro IPR003806; KEGG: sta:STHERM_c09640 CarB family protein; PFAM: ATP-grasp fold, DUF201-type; SPTR: Putative uncharacterized protein.
       0.811
AEJ61262.1
Cell wall hydrolase/autolysin; PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: sta:STHERM_c09650 hypothetical protein; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: Cell wall hydrolase/autolysin.
       0.811
AEJ61264.1
PFAM: Flagellar filament outer layer protein Flaa; InterPro IPR006714; KEGG: sta:STHERM_c09670 flagellar filament outer layer protein; PFAM: Flagellar filament outer layer protein FlaA; SPTR: Flagellar filament outer layer protein FlaA.
       0.602
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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