STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61552.1KEGG: sta:STHERM_c12490 hypothetical protein; SPTR: Putative uncharacterized protein. (401 aa)    
Predicted Functional Partners:
AEJ61551.1
PFAM: Cellulase (glycosyl hydrolase family 5); InterPro IPR001547; KEGG: sta:STHERM_c12480 cellulase, glycosyl hydrolase family 5; PFAM: Glycoside hydrolase, family 5; SPTR: Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.478
AEJ61586.1
PFAM: Glycosyl hydrolases family 43; InterPro IPR006710; KEGG: sta:STHERM_c08510 hypothetical protein; PFAM: Glycoside hydrolase, family 43; SPTR: Glycoside hydrolase family 43.
  
  
 0.464
AEJ61762.1
KEGG: sta:STHERM_c13630 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.464
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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