STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61750.1TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: sta:STHERM_c13510 transporter; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit. (341 aa)    
Predicted Functional Partners:
AEJ61752.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: sta:STHERM_c13530 transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.915
AEJ61751.1
PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: sta:STHERM_c13520 hypothetical protein; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component.
 
  
 0.893
AEJ62340.1
TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; Tripartite ATP-independent periplasmic transporters, DctQ component; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR007387:IPR010656:IPR004681; KEGG: sta:STHERM_c20420 transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.887
AEJ61909.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: bcl:ABC4044 TRAP-type transport system permease large protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.802
AEJ60671.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: sta:STHERM_c04210 transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.800
AEJ62397.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: sta:STHERM_c20970 transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.800
AEJ62338.1
KEGG: sta:STHERM_c20400 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.540
AEJ61911.1
PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: amt:Amet_3532 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component.
 
  
 0.519
AEJ61749.1
PFAM: Cupin domain; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: sta:STHERM_c13500 cupin 2, conserved barrel domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein.
       0.517
AEJ60670.1
PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: sta:STHERM_c04200 transporter; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component.
 
  
 0.501
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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