STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61753.1PFAM: von Willebrand factor type A domain; COGs: COG1240 Mg-chelatase subunit ChlD; InterPro IPR002035; KEGG: sta:STHERM_c13540 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor type A. (278 aa)    
Predicted Functional Partners:
AEJ61754.1
ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR003593:IPR011704; KEGG: sta:STHERM_c13550 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core; SPTR: Protoporphyrin IX magnesium-chelatase.
 
 0.998
AEJ61755.1
KEGG: sta:STHERM_c13560 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.762
AEJ61756.1
KEGG: sta:STHERM_c13570 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.537
AEJ61850.1
FAD dependent oxidoreductase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: sta:STHERM_c15440 phytoene dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase.
 
  
 0.477
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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