STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61760.1PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sta:STHERM_c13610 ABC transporter ATP binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein. (280 aa)    
Predicted Functional Partners:
AEJ61758.1
PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: sta:STHERM_c13590 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family.
 
  
 0.947
AEJ61757.1
PFAM: Protein of unknown function (DUF2807); KEGG: sta:STHERM_c13580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.779
AEJ61759.1
KEGG: sta:STHERM_c13600 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AEJ61767.1
PFAM: ABC-2 type transporter; KEGG: sta:STHERM_c13710 ABC-type transport system, permease; SPTR: Putative uncharacterized protein.
  
 
 0.625
AEJ62184.1
KEGG: sta:STHERM_c18810 bacitracin ABC transporter permease; SPTR: ABC transport system permease protein.
  
 
 0.625
AEJ61762.1
KEGG: sta:STHERM_c13630 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.529
AEJ61761.1
KEGG: sta:STHERM_c13620 hypothetical protein; SPTR: Putative alkylmercury lyase.
       0.524
hisS
PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: sta:STHERM_c15800 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup.
 
     0.479
AEJ61346.1
PUR-alpha/beta/gamma DNA/RNA-binding protein; PFAM: Protein of unknown function (DUF3276); InterPro IPR006628; KEGG: sta:STHERM_c10470 hypothetical protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR: Putative uncharacterized protein.
  
     0.440
argS
Arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR005148:IPR015945:IPR008909:IPR001278; KEGG: sta:STHERM_c10230 hypothetical protein; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic.
  
     0.425
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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