Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AEJ61768.1PFAM: ABC-type uncharacterized transport system; InterPro IPR019196; KEGG: sta:STHERM_c13720 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: ABC-type uncharacterized transport system. (488 aa)    
Predicted Functional Partners:
AEJ61767.1
PFAM: ABC-2 type transporter; KEGG: sta:STHERM_c13710 ABC-type transport system, permease; SPTR: Putative uncharacterized protein.
  
 0.992
AEJ61766.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sta:STHERM_c13700 transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
 
   
 0.951
AEJ61769.1
KEGG: sta:STHERM_c13730 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.948
AEJ61930.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: sta:STHERM_c16100 transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
 
   
 0.686
AEJ61765.1
KEGG: sta:STHERM_c13690 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.610
AEJ62273.1
KEGG: sta:STHERM_c19680 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.471
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
       0.405
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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