STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61804.1PFAM: Protein of unknown function (DUF861); COGs: COG3450 protein of the cupin superfamily; InterPro IPR008579; KEGG: sta:STHERM_c14050 hypothetical protein; PFAM: Protein of unknown function DUF861, cupin-3; SPTR: Putative uncharacterized protein. (89 aa)    
Predicted Functional Partners:
AEJ61803.1
PFAM: Peptidase family M48; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: sta:STHERM_c14040 peptidase, M48 family; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase M48 Ste24p.
       0.540
AEJ61966.1
PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013116:IPR000506; KEGG: sta:STHERM_c16450 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase C-terminal; Acetohydroxy acid isomeroreductase, catalytic; SPTR: Acetohydroxy acid isomeroreductase.
  
     0.496
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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