STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61832.1KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (237 aa)    
Predicted Functional Partners:
AEJ61836.1
Hypothetical protein.
       0.776
AEJ61833.1
Hypothetical protein.
       0.773
AEJ61834.1
Hypothetical protein.
       0.773
AEJ61835.1
Hypothetical protein.
       0.773
AEJ61837.1
Hypothetical protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; SPTR: Putative uncharacterized protein.
       0.773
AEJ61619.1
Sporulation domain-containing protein; PFAM: Sporulation related domain; InterPro IPR005132:IPR007730; KEGG: sta:STHERM_c08160 hypothetical protein; PFAM: Sporulation/cell division region, bacteria; Rare lipoprotein A; SPTR: Sporulation domain-containing protein.
    
 
 0.693
AEJ62011.1
PFAM: Alginate lyase; InterPro IPR014895; KEGG: cpy:Cphy_0492 alginate lyase 2; PFAM: Alginate lyase 2; SPTR: Alginate lyase 2.
    
 
 0.693
AEJ61238.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: sta:STHERM_c09390 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein.
  
  
 0.608
AEJ62408.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: sta:STHERM_c21080 hypothetical protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein.
  
  
 0.576
AEJ61239.1
PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: sta:STHERM_c09400 TolQ-type transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel.
  
  
 0.519
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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