STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61871.1Lipopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; COGs: COG3524 Capsule polysaccharide export protein; InterPro IPR003856; KEGG: sta:STHERM_c15650 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Lipopolysaccharide biosynthesis protein. (374 aa)    
Predicted Functional Partners:
AEJ61897.1
Soluble ligand binding domain-containing protein; PFAM: SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: sta:STHERM_c15850 polysaccharide biosynthesis protein; PFAM: Soluble ligand binding domain; SPTR: Soluble ligand binding domain.
 
 
 0.937
AEJ61868.1
PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: sta:STHERM_c15620 transporter; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein.
 
  
 0.811
AEJ61869.1
Glycosyltransferase; KEGG: sta:STHERM_c15630 glycosyltransferase; SPTR: Putative uncharacterized protein.
     
 0.810
AEJ61870.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: sta:STHERM_c15640 glycosyl transferase, group 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2.
  
  
 0.803
AEJ61888.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: tth:TTC0275 undecaprenyl-phosphate galactosephosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.620
AEJ61872.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sta:STHERM_c15660 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1.
  
  
 0.575
AEJ61620.1
PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: sta:STHERM_c08150 capsular polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Polysaccharide biosynthesis protein CapD.
  
  
 0.562
AEJ60719.1
PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: sta:STHERM_c04710 hypothetical protein; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase.
  
 
 0.426
AEJ61867.1
PFAM: LICD Protein Family; COGs: COG3475 LPS biosynthesis protein; InterPro IPR007074; KEGG: sta:STHERM_c15580 hypothetical protein; PFAM: LicD-like; SPTR: LicD family protein.
       0.413
AEJ61413.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: sta:STHERM_c11120 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein.
  
     0.412
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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